Ok, so I went reading and it turns out you must unlink the remote (which is not a big deal) since I can use the iPhone app to control the device. Here is the bummer.
The PE653 has five different controls (ie. pool pump/light/salt/temperature). It appears when I goto the Almond+ to add a sensor and I press the "include" button. Only 1 sensor gets added and it does not appear that you can add more by just repeating the process.
Now, I am a newbie at all this, but it seems that at this point some more investigation is needed by the Almond+ team. One thing (and not to impart upon your competition). The people at MiCasaVerde have a tremendously long thread on this exact item and they got all the sensors to work with the help of Intermatic who seems to be more than willing to assist.
If anyone else has any thoughts/suggestions I am more than glad to lend a hand or assist.